Institute of Biochemistry and Molecular Biology, ZBMZ, Faculty of Medicine, Albert-Ludwigs-University Freiburg, Freiburg, Germany.
Faculty of Biology, Albert-Ludwigs-University Freiburg, Freiburg, Germany.
PLoS Biol. 2020 Sep 30;18(9):e3000874. doi: 10.1371/journal.pbio.3000874. eCollection 2020 Sep.
Small membrane proteins represent a largely unexplored yet abundant class of proteins in pro- and eukaryotes. They essentially consist of a single transmembrane domain and are associated with stress response mechanisms in bacteria. How these proteins are inserted into the bacterial membrane is unknown. Our study revealed that in Escherichia coli, the 27-amino-acid-long model protein YohP is recognized by the signal recognition particle (SRP), as indicated by in vivo and in vitro site-directed cross-linking. Cross-links to SRP were also observed for a second small membrane protein, the 33-amino-acid-long YkgR. However, in contrast to the canonical cotranslational recognition by SRP, SRP was found to bind to YohP posttranslationally. In vitro protein transport assays in the presence of a SecY inhibitor and proteoliposome studies demonstrated that SRP and its receptor FtsY are essential for the posttranslational membrane insertion of YohP by either the SecYEG translocon or by the YidC insertase. Furthermore, our data showed that the yohP mRNA localized preferentially and translation-independently to the bacterial membrane in vivo. In summary, our data revealed that YohP engages an unique SRP-dependent posttranslational insertion pathway that is likely preceded by an mRNA targeting step. This further highlights the enormous plasticity of bacterial protein transport machineries.
小膜蛋白是原核生物和真核生物中一类尚未被充分探索但含量丰富的蛋白质,主要由一个单一的跨膜结构域组成,并与细菌的应激反应机制有关。这些蛋白质如何插入细菌膜是未知的。我们的研究表明,在大肠杆菌中,27 个氨基酸长的模型蛋白 YohP 被信号识别颗粒(SRP)识别,这一点通过体内和体外定点交联实验得到证实。第二个小膜蛋白 YkgR 也与 SRP 发生交联,但与典型的共翻译 SRP 识别不同,SRP 被发现是在翻译后与 YohP 结合。在存在 SecY 抑制剂的体外蛋白转运实验和脂质体研究中,证明了 SRP 和其受体 FtsY 对于 YohP 的翻译后膜插入是必需的,无论是通过 SecYEG 转运体还是 YidC 插入酶。此外,我们的数据表明,yohP mRNA 在体内优先定位于细菌膜并独立于翻译。总之,我们的数据揭示了 YohP 采用了一种独特的、依赖 SRP 的翻译后插入途径,该途径可能先于 mRNA 靶向步骤。这进一步凸显了细菌蛋白转运机制的巨大灵活性。