Suppr超能文献

在. 中全基因组鉴定和短链脱氢酶/还原酶 (SDR) 基因家族的特征分析

Genome-Wide Identification and Characterization of Short-Chain Dehydrogenase/Reductase (SDR) Gene Family in .

机构信息

College of Grassland Science, Nanjing Agricultural University, Nanjing 210095, China.

出版信息

Int J Mol Sci. 2021 Aug 31;22(17):9498. doi: 10.3390/ijms22179498.

Abstract

Short-chain dehydrogenase/reductase (SDR) belongs to the NAD(P)(H)-dependent oxidoreductase superfamily. Limited investigations reveal that SDRs participate in diverse metabolisms. A genome-wide identification of the SDR gene family in was conducted. A total of 213 genes were identified, and they were distributed on all chromosomes unevenly. MtSDR proteins were categorized into seven subgroups based on phylogenetic analysis and three types including 'classic', 'extended', and 'atypical', depending on the cofactor-binding site and active site. Analysis of the data from Gene Expression Atlas (MtGEA) showed that above half of were expressed in at least one organ, and lots of had a preference in a tissue-specific expression. The -acting element responsive to plant hormones (salicylic acid, ABA, auxin, MeJA, and gibberellin) and stresses were found in the promoter of some . Many genes of 765110114, and families were responsive to drought, salt, and cold. The study provides useful information for further investigation on biological functions of MtSDRs, especially in abiotic stress adaptation, in the future.

摘要

短链脱氢酶/还原酶 (SDR) 属于 NAD(P)(H) 依赖性氧化还原酶超家族。有限的研究表明,SDR 参与了多种代谢途径。本研究在 中进行了 SDR 基因家族的全基因组鉴定。共鉴定出 213 个基因,它们不均匀地分布在所有染色体上。根据系统发育分析,MtSDR 蛋白被分为七个亚组,根据辅因子结合位点和活性位点的不同,分为“经典”、“扩展”和“非典型”三种类型。对来自 基因表达图谱 (MtGEA) 的数据分析表明,超过一半的 在至少一个器官中表达,并且许多 在组织特异性表达中具有偏好性。在一些 的启动子中发现了对植物激素(水杨酸、ABA、生长素、MeJA 和赤霉素)和应激的响应元件。许多 765110114 和 家族的基因对干旱、盐和冷胁迫有响应。该研究为进一步研究 MtSDRs 的生物学功能提供了有用的信息,特别是在非生物胁迫适应方面。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b1db/8430790/3a27964ef7ec/ijms-22-09498-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验