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一种无标记电化学DNA生物传感器使用印刷电路板金电极(PCBGE)来检测严重急性呼吸综合征冠状病毒2(SARS-CoV-2),无需扩增。

A label-free electrochemical DNA biosensor used a printed circuit board gold electrode (PCBGE) to detect SARS-CoV-2 without amplification.

作者信息

Zambry Nor Syafirah, Awang Mohd Syafiq, Beh Khi Khim, Hamzah Hairul Hisham, Bustami Yazmin, Obande Godwin Attah, Khalid Muhammad Fazli, Ozsoz Mehmet, Manaf Asrulnizam Abd, Aziah Ismail

机构信息

Institute for Research in Molecular Medicine (INFORMM), Health Campus, Universiti Sains Malaysia, 16150 Kubang Kerian, Kelantan, Malaysia.

Collaborative Microelectronic Design Excellence Center (CEDEC), Universiti Sains Malaysia, Sains@USM, Level 1, Block C, No. 10 Persiaran Bukit Jambul, 11900 Bayan Lepas, Pulau Pinang, Malaysia.

出版信息

Lab Chip. 2023 Mar 14;23(6):1622-1636. doi: 10.1039/d2lc01159j.

Abstract

The emergence of coronavirus disease 2019 (COVID-19) motivates continuous efforts to develop robust and accurate diagnostic tests to detect severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). Detection of viral nucleic acids provides the highest sensitivity and selectivity for diagnosing early and asymptomatic infection because the human immune system may not be active at this stage. Therefore, this work aims to develop a label-free electrochemical DNA biosensor for SARS-CoV-2 detection using a printed circuit board-based gold substrate (PCBGE). The developed sensor used the nucleocapsid phosphoprotein (N) gene as a biomarker. The DNA sensor-based PCBGE was fabricated by self-assembling a thiolated single-stranded DNA (ssDNA) probe onto an Au surface, which performed as the working electrode (WE). The Au surface was then treated with 6-mercapto-1-hexanol (MCH) before detecting the target N gene to produce a well-oriented arrangement of the immobilized ssDNA chains. The successful fabrication of the biosensor was characterized using cyclic voltammetry (CV), electrochemical impedance spectroscopy (EIS), and atomic force microscopy (AFM). The DNA biosensor performances were evaluated using a synthetic SARS-CoV-2 genome and 20 clinical RNA samples from healthy and infected individuals through EIS. The developed DNA biosensor can detect as low as 1 copy per μL of the N gene within 5 minutes with a LOD of 0.50 μM. Interestingly, the proposed DNA sensor could distinguish the expression of SARS-CoV-2 RNA in a patient diagnosed with COVID-19 without any amplification technique. We believe that the proposed DNA sensor platform is a promising point-of-care (POC) device for COVID-19 viral infection since it offers a rapid detection time with a simple design and workflow detection system, as well as an affordable diagnostic assay.

摘要

2019年冠状病毒病(COVID-19)的出现促使人们不断努力开发强大而准确的诊断测试,以检测严重急性呼吸综合征冠状病毒2(SARS-CoV-2)。病毒核酸检测在诊断早期和无症状感染方面具有最高的灵敏度和选择性,因为人体免疫系统在这个阶段可能不活跃。因此,这项工作旨在开发一种基于印刷电路板的金基底(PCBGE)的无标记电化学DNA生物传感器,用于检测SARS-CoV-2。所开发的传感器使用核衣壳磷蛋白(N)基因作为生物标志物。基于DNA传感器的PCBGE是通过将硫醇化单链DNA(ssDNA)探针自组装到金表面制成的,该金表面作为工作电极(WE)。在检测目标N基因之前,先用6-巯基-1-己醇(MCH)处理金表面,以使固定的ssDNA链形成良好的定向排列。使用循环伏安法(CV)、电化学阻抗谱(EIS)和原子力显微镜(AFM)对生物传感器的成功制备进行了表征。通过EIS使用合成的SARS-CoV-2基因组和来自健康和感染个体的20份临床RNA样本对DNA生物传感器的性能进行了评估。所开发的DNA生物传感器在5分钟内可检测低至每微升1拷贝的N基因,检测限为0.50μM。有趣的是,所提出的DNA传感器无需任何扩增技术就能区分COVID-19确诊患者中SARS-CoV-2 RNA的表达。我们相信,所提出的DNA传感器平台是一种有前途的用于COVID-19病毒感染的即时检测(POC)设备,因为它具有快速的检测时间、简单的设计和工作流程检测系统,以及经济实惠的诊断检测方法。

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