Cell Biology and Plant Biochemistry, University of Regensburg, D-93053 Regensburg, Germany.
Biochemistry I, University of Regensburg, D-93053 Regensburg, Germany.
Biol Chem. 2023 Sep 8;404(11-12):1069-1084. doi: 10.1515/hsz-2023-0171. Print 2023 Oct 26.
mRNA translation is tightly regulated by various classes of RNA-binding proteins (RBPs) during development and in response to changing environmental conditions. In this study, we characterize the arginine-glycine-glycine (RGG) motif containing RBP family of representing homologues of the multifunctional translation regulators and ribosomal preservation factors Stm1 from yeast (ScStm1) and human SERBP1 (HsSERBP1). The Arabidopsis genome encodes three RGG proteins named AtRGGA, AtRGGB and AtRGGC. While AtRGGA is ubiquitously expressed, AtRGGB and AtRGGC are enriched in dividing cells. All AtRGGs localize almost exclusively to the cytoplasm and bind with high affinity to ssRNA, while being capable to interact with most nucleic acids, except dsRNA. A protein-interactome study shows that AtRGGs interact with ribosomal proteins and proteins involved in RNA processing and transport. In contrast to ScStm1, AtRGGs are enriched in ribosome-free fractions in polysome profiles, suggesting additional plant-specific functions. Mutant studies show that AtRGG proteins differentially regulate flowering time, with a distinct and complex temperature dependency for each AtRGG protein. In conclusion, we suggest that AtRGGs function in fine-tuning translation efficiency to control flowering time and potentially other developmental processes in response to environmental changes.
mRNA 翻译在发育过程中以及响应环境变化时受到各种 RNA 结合蛋白 (RBPs) 的严格调控。在这项研究中,我们对精氨酸-甘氨酸-甘氨酸 (RGG) 基序的 RBP 家族进行了表征,该家族代表了多功能翻译调节剂和核糖体保存因子 Stm1 的同源物,Stm1 来自酵母(ScStm1)和人类 SERBP1(HsSERBP1)。拟南芥基因组编码三个 RGG 蛋白,分别命名为 AtRGGA、AtRGGB 和 AtRGGC。虽然 AtRGGA 广泛表达,但 AtRGGB 和 AtRGGC 在分裂细胞中富集。所有 AtRGG 都几乎只定位于细胞质,与 ssRNA 具有高亲和力结合,同时能够与除 dsRNA 以外的大多数核酸相互作用。蛋白质相互作用组研究表明,AtRGGs 与核糖体蛋白以及参与 RNA 加工和运输的蛋白质相互作用。与 ScStm1 不同,AtRGGs 在核糖体图谱的无核糖体部分中富集,这表明存在额外的植物特异性功能。突变研究表明,AtRGG 蛋白在开花时间上的调节作用不同,每个 AtRGG 蛋白都具有独特而复杂的温度依赖性。总之,我们认为 AtRGGs 通过微调翻译效率来控制开花时间和潜在的其他发育过程,以响应环境变化。