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骨肉瘤中环RNA生物标志物的鉴定:一项最新的系统评价和荟萃分析

Identification of circRNA biomarkers in osteosarcoma: An updated systematic review and meta-analysis.

作者信息

Zhou Chunbin, Balmer Lois, Song Manshu, Mahara Gehendra, Wu Kezhou, Wang Wei, Wang Hu

机构信息

Center for Precision Health, School of Medical and Health Science, Edith Cowan University, Perth, WA, 6027, Australia.

Department of Orthopaedics, The First Affiliated Hospital of Shantou University Medical College, Shantou, Guangdong, 515041, China.

出版信息

Noncoding RNA Res. 2024 Jan 11;9(2):341-349. doi: 10.1016/j.ncrna.2024.01.007. eCollection 2024 Jun.

Abstract

Circular RNAs (circRNAs) play a crucial role in cancer development and progression. This study aimed to identify potential circRNA biomarkers for osteosarcoma. Articles published from January 2010 to September 2023 were searched across eight databases to compare circRNA expression profiles in osteosarcoma and control samples (human, animal and cell lines). Meta-analysis was conducted under a random effects model. Subgroup analysis of circRNAs in different samples and tissues was performed. Diagnostic value was evaluated using receiver operator characteristic curves. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis explored functions of circRNA host genes. A circRNA-miRNA-mRNA axis depicted the regulatory mechanism in osteosarcoma. Among 1356 circRNAs with differential expression were identified across 226 original studies, only 74 were reported in at least three published sub-studies. Meta-analysis identified 58 dysregulated circRNAs (52 upregulated and 6 downregulated). Eleven circRNAs consistently showed dysregulation in tissues and cell lines, with hsa_circ_0005721 showing potential as a circulating biomarker in osteosarcoma. Sensitivity analysis demonstrated 97 % consistency. The overall area under the curve was 0.87 (95 % CI, 0.83-0.89). GO and KEGG enrichment analyses revealed host gene involvement in cancer. The circRNA-miRNA-mRNA axis revealed the regulatory axis and interactions within osteosarcoma specifically. This study demonstrates circRNAs as potential diagnostic biomarkers for osteosarcoma. Consistently reported dysregulated circRNAs are potential biomarkers in osteosarcoma pathogenesis, with hsa_circ_0005721 as a potential circulating biomarker for diagnosis and treatment.

摘要

环状RNA(circRNAs)在癌症的发生和发展中起着至关重要的作用。本研究旨在鉴定骨肉瘤潜在的环状RNA生物标志物。检索了2010年1月至2023年9月期间在八个数据库中发表的文章,以比较骨肉瘤与对照样本(人、动物和细胞系)中的环状RNA表达谱。在随机效应模型下进行荟萃分析。对不同样本和组织中的环状RNA进行亚组分析。使用受试者工作特征曲线评估诊断价值。基因本体(GO)和京都基因与基因组百科全书(KEGG)富集分析探索环状RNA宿主基因的功能。环状RNA-微小RNA-信使RNA轴描绘了骨肉瘤中的调控机制。在226项原始研究中鉴定出的1356个差异表达的环状RNA中,只有74个在至少三项已发表的子研究中被报道。荟萃分析鉴定出58个失调的环状RNA(52个上调和6个下调)。11个环状RNA在组织和细胞系中始终显示出失调,其中hsa_circ_0005721显示出作为骨肉瘤循环生物标志物的潜力。敏感性分析显示一致性为97%。曲线下总面积为0.87(95%CI,0.83 - 0.89)。GO和KEGG富集分析揭示宿主基因参与癌症。环状RNA-微小RNA-信使RNA轴具体揭示了骨肉瘤内的调控轴和相互作用。本研究证明环状RNA是骨肉瘤潜在的诊断生物标志物。一致报道的失调环状RNA是骨肉瘤发病机制中的潜在生物标志物,hsa_circ_0005721作为诊断和治疗的潜在循环生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/650c/10945140/9e8d7100f8de/gr1.jpg

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