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核糖体激活血管生成素的结构机制。

Structural mechanism of angiogenin activation by the ribosome.

机构信息

RNA Therapeutics Institute, UMass Chan Medical School, Worcester, MA, USA.

Department of Microbiology and Physiological Systems, UMass Chan Medical School, Worcester, MA, USA.

出版信息

Nature. 2024 Jun;630(8017):769-776. doi: 10.1038/s41586-024-07508-8. Epub 2024 May 8.

Abstract

Angiogenin, an RNase-A-family protein, promotes angiogenesis and has been implicated in cancer, neurodegenerative diseases and epigenetic inheritance. After activation during cellular stress, angiogenin cleaves tRNAs at the anticodon loop, resulting in translation repression. However, the catalytic activity of isolated angiogenin is very low, and the mechanisms of the enzyme activation and tRNA specificity have remained a puzzle. Here we identify these mechanisms using biochemical assays and cryogenic electron microscopy (cryo-EM). Our study reveals that the cytosolic ribosome is the activator of angiogenin. A cryo-EM structure features angiogenin bound in the A site of the 80S ribosome. The C-terminal tail of angiogenin is rearranged by interactions with the ribosome to activate the RNase catalytic centre, making the enzyme several orders of magnitude more efficient in tRNA cleavage. Additional 80S-angiogenin structures capture how tRNA substrate is directed by the ribosome into angiogenin's active site, demonstrating that the ribosome acts as the specificity factor. Our findings therefore suggest that angiogenin is activated by ribosomes with a vacant A site, the abundance of which increases during cellular stress. These results may facilitate the development of therapeutics to treat cancer and neurodegenerative diseases.

摘要

血管生成素是一种 RNase-A 家族蛋白,它能促进血管生成,并与癌症、神经退行性疾病和表观遗传遗传有关。在细胞应激过程中被激活后,血管生成素会在反密码环处切割 tRNA,从而抑制翻译。然而,分离的血管生成素的催化活性非常低,酶的激活和 tRNA 特异性的机制仍然是一个谜。在这里,我们使用生化测定和低温电子显微镜(cryo-EM)来确定这些机制。我们的研究揭示了细胞质核糖体是血管生成素的激活剂。低温电镜结构显示血管生成素结合在 80S 核糖体的 A 位。血管生成素的 C 末端尾巴通过与核糖体的相互作用重新排列,激活了 RNase 催化中心,使酶对 tRNA 切割的效率提高了几个数量级。额外的 80S-血管生成素结构捕捉到核糖体如何将 tRNA 底物引导到血管生成素的活性位点,表明核糖体充当特异性因子。因此,我们的发现表明,血管生成素是由空 A 位的核糖体激活的,而在细胞应激过程中,A 位的核糖体数量会增加。这些结果可能有助于开发治疗癌症和神经退行性疾病的疗法。

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