Faculty of Engineering Sciences, Kyushu University, 6-1 Kasuga-koen, Kasuga, Fukuoka 816-8580, Japan.
Faculty of Engineering Sciences, Kyushu University, 6-1 Kasuga-koen, Kasuga, Fukuoka 816-8580, Japan.
Comput Methods Programs Biomed. 2024 Oct;255:108354. doi: 10.1016/j.cmpb.2024.108354. Epub 2024 Jul 23.
Viral respiratory infections stand as a considerable global health concern, presenting significant risks to the health of both humans and animals. This study aims to conduct a preliminary analysis of the time series of viral load in the nasal cavity-nasopharynx (NC-NP) of the human and rhesus macaque (RM).
Taking into account the random uniform distribution of virus-laden droplets with a diameter of 10 μm in the mucus layer, this study applies the computational fluid dynamics-host cell dynamics (CFD-HCD) method to 3D-shell NC-NP models of human and RM, analyzing the impact of initial distribution of droplets on the viral dynamics of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), estimating parameters in the HCD model based on experimental data, integrating them into simulations to predict the time series of viral load and cell counts, and being visualized. The reproductive number (R) are calculated to determine the occurrence of infection. The study also considers cross-parameter combinations and cross-experimental datasets to explore potential correlations between the human and RM.
The research findings indicate that the uniform distribution of virus-laden droplets throughout the whole NC-NP models of human and RM is reasonable for simulating and predicting viral dynamics. The visualization results offer dynamic insights into virus infection over a period of 20 days. Studies involving parameter and dataset exchanges between the two species underscore certain similarities in predicting virus infections between the human and RM.
This study lays the groundwork for further exploration into the parallels and distinctions in respiratory virus dynamics between humans and RMs, thus aiding in making more informed decisions in research and experimentation.
病毒呼吸道感染是一个全球性的健康问题,对人类和动物的健康都构成了重大威胁。本研究旨在对人类和恒河猴鼻腔-鼻咽(NC-NP)的病毒载量时间序列进行初步分析。
考虑到直径为 10μm 的带病毒飞沫在黏液层中的随机均匀分布,本研究采用计算流体动力学-宿主细胞动力学(CFD-HCD)方法对人类和恒河猴的 3D 壳 NC-NP 模型进行分析,研究飞沫初始分布对严重急性呼吸综合征冠状病毒 2(SARS-CoV-2)病毒动力学的影响,根据实验数据估计 HCD 模型中的参数,将其整合到模拟中以预测病毒载量和细胞计数的时间序列,并进行可视化。计算繁殖数(R)以确定感染的发生。本研究还考虑了交叉参数组合和交叉实验数据集,以探索人类和恒河猴之间的潜在相关性。
研究结果表明,在人类和恒河猴的整个 NC-NP 模型中均匀分布带病毒飞沫对于模拟和预测病毒动力学是合理的。可视化结果提供了 20 天内病毒感染的动态信息。涉及两个物种之间参数和数据集交换的研究强调了在预测人类和恒河猴之间病毒感染方面的某些相似性。
本研究为进一步探索人类和恒河猴呼吸道病毒动力学的相似性和差异性奠定了基础,从而有助于在研究和实验中做出更明智的决策。