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基于下一代CRISPR/Cas的超灵敏诊断工具:当前进展与展望

Next-generation CRISPR/Cas-based ultrasensitive diagnostic tools: current progress and prospects.

作者信息

Sahel Deepak Kumar, Giriprasad Gangadari, Jatyan Reena, Guha Sonia, Korde Aishwarya, Mittal Anupama, Bhand Sunil, Chitkara Deepak

机构信息

Department of Pharmacy, Birla Institute of Technology and Science, Pilani Vidya Vihar Pilani 333031 Rajasthan India

Department of Chemistry, KK Birla Goa Campus, BITS Pilani Goa 403726 India.

出版信息

RSC Adv. 2024 Oct 14;14(44):32411-32435. doi: 10.1039/d4ra04838e. eCollection 2024 Oct 9.

Abstract

CRISPR/Cas has been explored as a powerful molecular scissor that uses a double-strand break mediated non-homologous end joining (NHEJ) or homology-directed repair (HDR) to achieve precise gene editing. Cas effectors come in several different forms, each with its own set of features and applications. SpCas9 was the first and most extensively studied CRISPR/Cas version, and it has been hailed as a biotechnology breakthrough that could potentially correct mutations to treat genetic diseases. Recently, the Cas12 and Cas13 effector variants of Class II, Type V and Type VI, have been explored for their specific collateral cleavage (-cleavage) activity on target recognition. This -cleavage activity helps in the recognition of target nucleic acids. CRISPR diagnostics technology utilized the binding of crRNA with Cas12/13 protein to form the Ribonucleoproteins (RNPs) complex, which further cleaves the target sequence in -cleavage, followed by the activation of -cleavage of a nonspecific fluorescent DNA/RNA probe, resulting in the production of a fluorescent signal that could be quantitatively recorded. Later, nanotechnology and mobile-based detection applications were incorporated into the system to develop advanced lateral flow-based strips and are also associated with the technology to make it more feasible. Overall, this review compiles the experimental evidence consolidating the application of CRISPR/Cas as next-generation biosensors for diagnostic applications.

摘要

CRISPR/Cas已被视为一种强大的分子剪刀,它利用双链断裂介导的非同源末端连接(NHEJ)或同源定向修复(HDR)来实现精确的基因编辑。Cas效应蛋白有几种不同的形式,每种都有其自身的一系列特征和应用。SpCas9是首个也是研究最广泛的CRISPR/Cas版本,它被誉为一项生物技术突破,有可能校正突变以治疗遗传疾病。最近,II类、V型和VI型的Cas12和Cas13效应变体因其在靶标识别上的特异性旁切(-切割)活性而受到研究。这种-切割活性有助于靶标核酸的识别。CRISPR诊断技术利用crRNA与Cas12/13蛋白的结合形成核糖核蛋白(RNP)复合物,该复合物在-切割中进一步切割靶标序列,随后激活非特异性荧光DNA/RNA探针的-切割,产生可定量记录的荧光信号。后来,纳米技术和基于移动设备的检测应用被纳入该系统,以开发先进的基于侧向流动的试纸条,并且该技术也与之相关联,使其更具可行性。总体而言,本综述汇编了实验证据,巩固了CRISPR/Cas作为用于诊断应用的下一代生物传感器的应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ff0/11472282/36eddef3b6ce/d4ra04838e-f1.jpg

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