Nguyen Quynh, Tung Lin Wei, Lin Bruce, Sivakumar Raam, Sar Funda, Singhera Gurpreet, Wang Ying, Parker Jeremy, Le Bihan Stephane, Singh Amrit, M V Rossi Fabio, Collins Colin, Bashir Jamil, Laksman Zachary
Division of Cardiac Surgery, Department of Surgery, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.
School of Biomedical Engineering, University of British Columbia, Vancouver, BC V6T 2B9, Canada.
Int J Mol Sci. 2025 Jan 24;26(3):995. doi: 10.3390/ijms26030995.
Spatial transcriptomics has transformed our understanding of gene expression by preserving the spatial context within tissues. This review focuses on the application of spatial transcriptomics in human cardiac tissues, exploring current technologies with a focus on commercially available platforms. We also highlight key studies utilizing spatial transcriptomics to investigate cardiac development, electro-anatomy, immunology, and ischemic heart disease. These studies demonstrate how spatial transcriptomics can be used in conjunction with other omics technologies to provide a more comprehensive picture of human health and disease. Despite its transformative potential, spatial transcriptomics comes with several challenges that limit its widespread adoption and broader application. By addressing these limitations and fostering interdisciplinary collaboration, spatial transcriptomics has the potential to become an essential tool in cardiovascular research. We hope this review serves as a practical guide for researchers interested in adopting spatial transcriptomics, particularly those with limited prior experience, by providing insights into current technologies, applications, and considerations for successful implementation.
空间转录组学通过保留组织内的空间背景,改变了我们对基因表达的理解。本综述重点关注空间转录组学在人类心脏组织中的应用,探讨当前技术,重点是商业可用平台。我们还强调了利用空间转录组学研究心脏发育、电解剖学、免疫学和缺血性心脏病的关键研究。这些研究展示了空间转录组学如何与其他组学技术结合使用,以提供关于人类健康和疾病的更全面图景。尽管空间转录组学具有变革潜力,但它也面临一些挑战,限制了其广泛采用和更广泛的应用。通过解决这些限制并促进跨学科合作,空间转录组学有潜力成为心血管研究中的重要工具。我们希望本综述能为有兴趣采用空间转录组学的研究人员,特别是那些经验有限的研究人员,提供实用指南,通过深入了解当前技术、应用以及成功实施的注意事项。