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多组学作为促进针对呼吸道合胞病毒感染全面管理的3P医学方法的工具。

Multiomics as instrument to promote 3P medical approaches for the overall management of respiratory syncytial viral infections.

作者信息

Bajinka Ousman, Ouedraogo Serge Yannick, Li Na, Zhan Xianquan

机构信息

Shandong Provincial Key Laboratory of Precision Oncology, Shandong First Medical University & Shandong Academy of Medical Sciences, Shandong Cancer Hospital and Institute, 440 Jiyan Road, Jinan, Shandong 250117 People's Republic of China.

Shandong Provincial Key Medical and Health Laboratory of Ovarian Cancer Multiomics, & Jinan Key Laboratory of Cancer Multiomics, Medical Science and Technology Innovation Center, Shandong First Medical University & Shandong Academy of Medical Sciences, 6699 Qingdao Road, Jinan, Shandong 250117 People's Republic of China.

出版信息

EPMA J. 2025 Jan 16;16(1):217-238. doi: 10.1007/s13167-024-00395-z. eCollection 2025 Mar.

Abstract

Respiratory syncytial viral (RSV) infection is a leading persisting pulmonary disease-causing agent. It causes loss of lives especially among infants, old ages, and adults immunocompromised individuals. This viral pathogen infects children more especially those under the age of 2 and may lead to death. It causes 3 million hospitalizations and up to 60,000 deaths annually for under the age of 5. The most vulnerable are immunocompromised individuals and asthmatic children with suboptimal antiviral defenses. It is associated with bronchiolitis, pneumonia, and bronchopneumonia. Despite all the current interventions and clinical trials, the only available therapeutic strategies for this viral infection are palliative care. Therefore, it is imperative to understand the pathogenicity of RSV and the corresponding host immune response to depict a sort of a targeted intervention. With the increasingly cutting-edge methods in harnessing the pathogenicity of this viral infection, high throughput systems including omics technological advances are at the spotlight. For instance, the associated genes with RSV complications for the host, the set of microbiome identified as operational taxonomic unit, the upregulated or downregulated metabolites, the protein subtypes, and the small molecules can help explain the viral microenvironment. Moreover, these big data will lead to RSV patients' stratification through individualized patient profiles that will bring in targeted prevention and treatment algorithms tailored to individualized patients' profiles. Through this, the virus and host interactions based on the pathogenicity of infection will provide a strong ground for depicting the prevention, prediction, and personalized medicine (3PM) for RSV. The 3PM approach brought cutting edge functional medicine to the healthcare givers, thus conferring targeted prevention and precision medicine while observing personalized treatment as well as preventive regularities. The viral replication mechanisms against the host defense mechanisms are crucial for the development of safe and effective therapy. Integrative personal omics profiles, whose analysis is based on the combined proteomics, transcriptomics, genomics, proteoformics, metabolomics, and autoantibody profiles, are very robust for predicting the risk of RSV infection. The targeted prevention will emerge from the patient stratification when the diagnosis is accurately predicted. In addition, the personalized medical services will give an effective prognostic assessment for RSV complications.

摘要

呼吸道合胞病毒(RSV)感染是一种主要的持续性肺部致病病原体。它会导致死亡,尤其是在婴儿、老年人和免疫功能低下的成年人中。这种病毒病原体尤其容易感染2岁以下的儿童,可能导致死亡。每年它会导致5岁以下儿童300万次住院,多达6万人死亡。最易感染的是免疫功能低下的个体以及抗病毒防御能力欠佳的哮喘儿童。它与细支气管炎、肺炎和支气管肺炎有关。尽管有目前所有的干预措施和临床试验,但针对这种病毒感染唯一可用的治疗策略是姑息治疗。因此,必须了解RSV的致病性以及相应的宿主免疫反应,以描述一种有针对性的干预措施。随着利用这种病毒感染致病性的方法越来越先进,包括组学技术进步在内的高通量系统备受关注。例如,与宿主RSV并发症相关的基因、被鉴定为可操作分类单元的微生物群落、上调或下调的代谢物、蛋白质亚型和小分子,都有助于解释病毒微环境。此外,这些大数据将通过个性化患者档案实现RSV患者分层,从而带来针对个性化患者档案量身定制的预防和治疗算法。通过这种方式,基于感染致病性的病毒与宿主相互作用将为描述RSV的预防、预测和个性化医学(3PM)提供有力依据。3PM方法为医疗服务提供者带来了前沿的功能医学,从而在遵循个性化治疗以及预防规律的同时,实现有针对性的预防和精准医学。病毒针对宿主防御机制的复制机制对于安全有效的治疗发展至关重要。基于蛋白质组学、转录组学、基因组学、蛋白质变体组学、代谢组学和自身抗体谱组合分析的综合个人组学档案,对于预测RSV感染风险非常有效。当诊断得到准确预测时,有针对性的预防将从患者分层中产生。此外,个性化医疗服务将为RSV并发症提供有效的预后评估。

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