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用于……的适应性实验室进化应用的进展

Advances in adaptive laboratory evolution applications for .

作者信息

Peng Weixiang, Zhang Xi, Qi Qingsheng, Liang Quanfeng

机构信息

State Key Laboratory of Microbial Technology, Taishan college, School of Life Science, Shandong University, Qingdao, 266237, PR China.

出版信息

Synth Syst Biotechnol. 2025 Jul 30;10(4):1306-1321. doi: 10.1016/j.synbio.2025.07.011. eCollection 2025 Dec.

Abstract

Adaptive Laboratory Evolution (ALE), a well-established framework in microbial evolution research, is widely applied in synthetic biology. By simulating natural selection through controlled serial culturing, ALE promotes the accumulation of beneficial mutations, leading to the emergence of specific adaptive phenotypes and bypassing the complexities inherent in rational genetic engineering. With advancements in next-generation sequencing and molecular biology, the integration of high-throughput omics and molecular tools with ALE has significantly enhanced the mapping of genotype-phenotype relationships and the characterization of mutational landscapes. This has propelled progress in microbial evolution, biochemical theory, and interdisciplinary applications. (), a premier chassis in synthetic biology, benefits from its genetic tractability and metabolic flexibility, making it an ideal model for ALE studies. This review examines recent developments in ALE applications for , exploring its methodological principles, experimental design paradigms, notable case studies, and synergies with emerging technologies, providing valuable theoretical insights and practical guidance for related research.

摘要

适应性实验室进化(ALE)是微生物进化研究中一个成熟的框架,在合成生物学中得到广泛应用。通过可控的连续传代培养模拟自然选择,ALE促进有益突变的积累,导致特定适应性表型的出现,并绕过了理性基因工程中固有的复杂性。随着下一代测序和分子生物学的进步,高通量组学和分子工具与ALE的整合显著增强了基因型-表型关系的映射以及突变景观的表征。这推动了微生物进化、生化理论和跨学科应用的进展。()是合成生物学中的一个主要底盘,因其遗传易处理性和代谢灵活性而受益,使其成为ALE研究的理想模型。本综述考察了ALE在()应用中的最新进展,探讨了其方法原理、实验设计范式、显著的案例研究以及与新兴技术的协同作用,为相关研究提供了有价值的理论见解和实践指导。

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