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关于溴隐亭与组胺相关信号网络中GPCRs结合的分子见解:网络药理学、药效团建模及分子动力学模拟

Molecular Insights into Bromocriptine Binding to GPCRs Within Histamine-Linked Signaling Networks: Network Pharmacology, Pharmacophore Modeling, and Molecular Dynamics Simulation.

作者信息

Dermawan Doni, Elbouamri Lamiae, Chtita Samir, Alotaiq Nasser

机构信息

Department of Applied Biotechnology, Faculty of Chemistry, Warsaw University of Technology, 00-661 Warsaw, Poland.

Laboratory of Analytical and Molecular Chemistry, Faculty of Sciences Ben M'Sik, Hassan II University of Casablanca, Casablanca 20670, Morocco.

出版信息

Int J Mol Sci. 2025 Sep 7;26(17):8717. doi: 10.3390/ijms26178717.

Abstract

This study aimed to investigate the molecular binding mechanisms of bromocriptine toward histamine-associated targets, exploring both antagonist-like and other potential interaction modes that may support therapeutic repurposing. Network pharmacology was applied to identify histamine-related pathways and prioritize potential protein targets. CXCR4, GHSR, and OXTR were selected based on combined docking scores and pharmacophore modeling evidence. Molecular dynamics (MD) simulations over 100 ns assessed structural stability, flexibility, compactness, and solvent exposure. Binding site contact analysis and MM/PBSA free binding energy calculations were conducted to characterize binding energetics and interaction persistence. Bromocriptine exhibited stable binding to all three receptors, engaging key residues implicated in receptor modulation (e.g., Asp187 in CXCR4, Asp99 in GHSR, Arg232 in OXTR). The MM/PBSA ΔG_binding values of bromocriptine were -22.67 ± 3.70 kcal/mol (CXCR4 complex), -22.11 ± 3.55 kcal/mol (GHSR complex), and -21.43 ± 2.41 kcal/mol (OXTR complex), stronger than standard agonists and comparable to antagonists. Contact profiles revealed shared and unique binding patterns across targets, reflecting their potential for diverse modulatory effects. Bromocriptine demonstrates high-affinity binding to multiple histamine-associated GPCR targets, potentially exerting both inhibitory and modulatory actions. These findings provide a molecular basis for further experimental validation and therapeutic exploration in histamine-related conditions.

摘要

本研究旨在探究溴隐亭与组胺相关靶点的分子结合机制,探索类似拮抗剂的作用模式以及其他可能支持治疗性药物重新利用的潜在相互作用模式。应用网络药理学来识别组胺相关途径并对潜在的蛋白质靶点进行优先级排序。基于综合对接分数和药效团模型证据,选择了CXCR4、GHSR和OXTR。超过100纳秒的分子动力学(MD)模拟评估了结构稳定性、灵活性、紧凑性和溶剂暴露情况。进行了结合位点接触分析和MM/PBSA自由结合能计算,以表征结合能和相互作用持续性。溴隐亭与所有三种受体均表现出稳定结合,与参与受体调节的关键残基相互作用(例如,CXCR4中的Asp187、GHSR中的Asp99、OXTR中的Arg232)。溴隐亭的MM/PBSA ΔG_binding值分别为-22.67 ± 3.70 kcal/mol(CXCR4复合物)、-22.11 ± 3.55 kcal/mol(GHSR复合物)和-21.43 ± 2.41 kcal/mol(OXTR复合物),比标准激动剂更强,与拮抗剂相当。接触图谱揭示了各靶点间共享和独特的结合模式,反映了它们产生多种调节作用的潜力。溴隐亭显示出对多个组胺相关GPCR靶点的高亲和力结合,可能发挥抑制和调节作用。这些发现为在组胺相关病症中进行进一步的实验验证和治疗探索提供了分子基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56b7/12428908/1e726fccebcb/ijms-26-08717-g005.jpg

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