Suppr超能文献

协调 ELAV/Hu mRNA 调控物的机制。

Mechanisms coordinating ELAV/Hu mRNA regulons.

机构信息

Department of Molecular Genetics & Microbiology, Duke University Medical Center, Durham, NC 27710, United States.

出版信息

Curr Opin Genet Dev. 2013 Feb;23(1):35-43. doi: 10.1016/j.gde.2012.12.006. Epub 2013 Jan 9.

Abstract

The 5' and 3' untranslated regions (UTRs) of messenger RNAs (mRNAs) function as platforms that can determine the fate of each mRNA individually and in aggregate. Multiple mRNAs that encode proteins that are functionally related often interact with RNA-binding proteins (RBPs) and noncoding RNAs (ncRNAs) that coordinate their expression in time and space as RNA regulons within the ribonucleoprotein (RNP) infrastructure we term the ribonome. Recent ribonomic methods have emerged that can determine which mRNAs are bound and regulated by RBPs and ncRNAs, some of which act in combination to determine global outcomes. ELAV/Hu proteins bind to AU-rich elements (ARE) in mRNAs and regulate their stability from splicing to translation, and the ubiquitous HuR protein has been implicated in cancerous cell growth. Recent work is focused on mechanistic models of how ELAV/Hu proteins increase mRNA stability and translation by repressing microRNAs (miRs) and the RNA induced silencing complex (RISC) via ARE-based ribonucleosomes that may affect global functions of mRNA regulons.

摘要

信使 RNA(mRNA)的 5' 和 3' 非翻译区(UTRs)作为平台,可以单独和总体上决定每个 mRNA 的命运。编码功能相关蛋白质的多个 mRNA 经常与 RNA 结合蛋白(RBPs)和非编码 RNA(ncRNAs)相互作用,作为核糖核蛋白(RNP)基础设施内的 RNA 调控子,在时间和空间上协调它们的表达,我们称之为核糖组。最近出现了核糖组学方法,可以确定哪些 mRNA 被 RBPs 和 ncRNAs 结合和调节,其中一些组合作用以确定全局结果。ELAV/Hu 蛋白与 mRNA 中的富含 AU 元件(ARE)结合,并调节它们从剪接到翻译的稳定性,而普遍存在的 HuR 蛋白与癌细胞生长有关。最近的工作集中在 ELAV/Hu 蛋白通过基于 ARE 的核小体抑制 microRNAs(miRs)和 RNA 诱导沉默复合物(RISC)来增加 mRNA 稳定性和翻译的机制模型上,这可能会影响 mRNA 调控子的全局功能。

相似文献

1
Mechanisms coordinating ELAV/Hu mRNA regulons.
Curr Opin Genet Dev. 2013 Feb;23(1):35-43. doi: 10.1016/j.gde.2012.12.006. Epub 2013 Jan 9.
2
ELAV/Hu RNA binding proteins determine multiple programs of neural alternative splicing.
PLoS Genet. 2021 Apr 7;17(4):e1009439. doi: 10.1371/journal.pgen.1009439. eCollection 2021 Apr.
4
Post-transcriptional regulation of neuro-oncological ventral antigen 1 by the neuronal RNA-binding proteins ELAV.
J Biol Chem. 2008 Mar 21;283(12):7531-41. doi: 10.1074/jbc.M706082200. Epub 2008 Jan 24.
6
Hyper conserved elements in vertebrate mRNA 3'-UTRs reveal a translational network of RNA-binding proteins controlled by HuR.
Nucleic Acids Res. 2013 Mar 1;41(5):3201-16. doi: 10.1093/nar/gkt017. Epub 2013 Feb 1.
7
Identification of a target RNA motif for RNA-binding protein HuR.
Proc Natl Acad Sci U S A. 2004 Mar 2;101(9):2987-92. doi: 10.1073/pnas.0306453101. Epub 2004 Feb 23.
8
Hu antigen R (HuR) is a positive regulator of the RNA-binding proteins TDP-43 and FUS/TLS: implications for amyotrophic lateral sclerosis.
J Biol Chem. 2014 Nov 14;289(46):31792-31804. doi: 10.1074/jbc.M114.573246. Epub 2014 Sep 19.

引用本文的文献

2
Elavl1 deletion in limb mesenchyme is dispensable for skeletal morphogenesis.
Front Cell Dev Biol. 2025 Jul 14;13:1501837. doi: 10.3389/fcell.2025.1501837. eCollection 2025.
3
6
Elavl1 is dispensable for appendicular skeletal development.
bioRxiv. 2024 Sep 24:2024.09.23.614008. doi: 10.1101/2024.09.23.614008.
8
EARLY FLOWERING is a dominant gain-of-function allele of FANTASTIC FOUR 1/2c that promotes early flowering in tomato.
Plant Biotechnol J. 2024 Mar;22(3):698-711. doi: 10.1111/pbi.14217. Epub 2023 Nov 6.
9
Transfer Learning Allows Accurate RBP Target Site Prediction with Limited Sample Sizes.
Biology (Basel). 2023 Sep 25;12(10):1276. doi: 10.3390/biology12101276.
10
Palmitic Acid-Induced Long Noncoding RNA Regulates Inflammation via Interaction With RNA-Binding Protein ELAVL1 in Monocytes and Macrophages.
Arterioscler Thromb Vasc Biol. 2023 Jul;43(7):1157-1175. doi: 10.1161/ATVBAHA.122.318536. Epub 2023 Apr 27.

本文引用的文献

1
RNA regulons and the RNA-protein interaction network.
Biomol Concepts. 2012 Oct;3(5):403-14. doi: 10.1515/bmc-2012-0016.
2
FMRP targets distinct mRNA sequence elements to regulate protein expression.
Nature. 2012 Dec 20;492(7429):382-6. doi: 10.1038/nature11737. Epub 2012 Dec 12.
3
RIP-chip enrichment analysis.
Bioinformatics. 2013 Jan 1;29(1):77-83. doi: 10.1093/bioinformatics/bts631. Epub 2012 Oct 26.
5
HuR protein attenuates miRNA-mediated repression by promoting miRISC dissociation from the target RNA.
Nucleic Acids Res. 2012 Jun;40(11):5088-100. doi: 10.1093/nar/gks148. Epub 2012 Feb 23.
6
Genome-wide studies of mRNA synthesis and degradation in eukaryotes.
Biochim Biophys Acta. 2012 Jun;1819(6):604-15. doi: 10.1016/j.bbagrm.2011.12.002. Epub 2011 Dec 11.
7
Neuron-specific ELAV/Hu proteins suppress HuR mRNA during neuronal differentiation by alternative polyadenylation.
Nucleic Acids Res. 2012 Mar;40(6):2734-46. doi: 10.1093/nar/gkr1114. Epub 2011 Dec 1.
8
The mRNA stability factor HuR inhibits microRNA-16 targeting of COX-2.
Mol Cancer Res. 2012 Jan;10(1):167-80. doi: 10.1158/1541-7786.MCR-11-0337. Epub 2011 Nov 2.
9
The RNA-binding protein HuR opposes the repression of ERBB-2 gene expression by microRNA miR-331-3p in prostate cancer cells.
J Biol Chem. 2011 Dec 2;286(48):41442-41454. doi: 10.1074/jbc.M111.301481. Epub 2011 Oct 4.
10
Posttranscriptional control and the role of RNA-binding proteins in gene regulation in trypanosomatid protozoan parasites.
Wiley Interdiscip Rev RNA. 2010 Jul-Aug;1(1):34-46. doi: 10.1002/wrna.6. Epub 2010 May 6.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验