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鉴定着丝粒:揭示隐藏的片段。

Identification of the centromeres of : revealing the hidden pieces.

机构信息

Department of Parasitology-Mycology, Faculty of Medicine, University of Montpellier, Montpellier, France.

CNRS 5290 - IRD 224 - University of Montpellier (UMR "MiVEGEC"), Montpellier, France.

出版信息

EMBO Rep. 2017 Nov;18(11):1968-1977. doi: 10.15252/embr.201744216. Epub 2017 Sep 21.

Abstract

affects millions of people worldwide. Its genome undergoes constitutive mosaic aneuploidy, a type of genomic plasticity that may serve as an adaptive strategy to survive distinct host environments. We previously found high rates of asymmetric chromosome allotments during mitosis that lead to the generation of such ploidy. However, the underlying molecular events remain elusive. Centromeres and kinetochores most likely play a key role in this process, yet their identification has failed using classical methods. Our analysis of the unconventional kinetochore complex recently discovered in (KKTs) leads to the identification of a KKT gene candidate (LmKKT1). The GFP-tagged LmKKT1 displays "kinetochore-like" dynamics of intranuclear localization throughout the cell cycle. By ChIP-Seq assay, one major peak per chromosome is revealed, covering a region of 4 ±2 kb. We find two largely conserved motifs mapping to 14 of 36 chromosomes while a higher density of retroposons are observed in 27 of 36 centromeres. The identification of centromeres and of a kinetochore component of chromosomes opens avenues to explore their role in mosaic aneuploidy.

摘要

其基因组经历组成型镶嵌性非整倍体,这是一种基因组可塑性,可能作为一种适应策略,以在不同的宿主环境中生存。我们之前发现,在有丝分裂过程中存在很高的不对称染色体分配率,导致了这种倍性的产生。然而,潜在的分子事件仍然难以捉摸。着丝粒和动粒很可能在这个过程中发挥关键作用,但使用经典方法未能识别它们。我们对最近在 (KKTs)中发现的非传统动粒复合物的分析导致了一个 KKT 基因候选物(LmKKT1)的鉴定。GFP 标记的 LmKKT1 在整个细胞周期中表现出“动粒样”的核内定位动力学。通过 ChIP-Seq 分析,每条染色体都揭示了一个主要峰值,覆盖了 4±2kb 的区域。我们发现,有两个主要的保守基序映射到 36 条染色体中的 14 条,而在 36 个着丝粒中有 27 个观察到反转录转座子的密度更高。 染色体着丝粒和动粒成分的鉴定为探索它们在镶嵌性非整倍体中的作用开辟了途径。

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