Integrative Parasitology, Center for Infectious Diseases, Heidelberg University Medical School, Im Neuenheimer Feld 344, 69120, Heidelberg, Germany.
Structural and Computational Biology Unit, European Molecular Biology Laboratory, Meyerhofstrasse 1, 69117, Heidelberg, Germany.
Sci Rep. 2018 Jul 26;8(1):11249. doi: 10.1038/s41598-018-29590-5.
The nuclear pore complex (NPC) is a large macromolecular assembly of around 30 different proteins, so-called nucleoporins (Nups). Embedded in the nuclear envelope the NPC mediates bi-directional exchange between the cytoplasm and the nucleus and plays a role in transcriptional regulation that is poorly understood. NPCs display modular arrangements with an overall structure that is generally conserved among many eukaryotic phyla. However, Nups of yeast or human origin show little primary sequence conservation with those from early-branching protozoans leaving those of the malaria parasite unrecognized. Here we have combined bioinformatic and genetic methods to identify and spatially characterize Nup components in the rodent infecting parasite Plasmodium berghei and identified orthologs from the human malaria parasite P. falciparum, as well as the related apicomplexan parasite Toxoplasma gondii. For the first time we show the localization of selected Nups throughout the P. berghei life cycle. Largely restricted to apicomplexans we identify an extended C-terminal poly-proline extension in SEC13 that is essential for parasite survival and provide high-resolution images of Plasmodium NPCs obtained by cryo electron tomography. Our data provide the basis for full characterization of NPCs in malaria parasites, early branching unicellular eukaryotes with significant impact on human health.
核孔复合体(NPC)是由大约 30 种不同的蛋白质,即核孔蛋白(Nups)组成的大型大分子复合物。NPC 嵌入核膜中,介导细胞质和细胞核之间的双向交换,并在转录调控中发挥作用,但目前对此知之甚少。NPC 具有模块化排列,其整体结构在许多真核生物门中普遍保守。然而,酵母或人类来源的 Nups 与早期分支原生动物的 Nups 几乎没有初级序列保守性,这使得疟原虫的 Nups 未被识别。在这里,我们结合生物信息学和遗传方法,鉴定和空间表征了感染啮齿动物的寄生虫疟原虫伯氏疟原虫中的 Nup 成分,并鉴定了人类疟原虫疟原虫和相关的顶复门寄生虫刚地弓形虫的同源物。我们首次展示了选定的 Nups 在整个疟原虫生命周期中的定位。我们在很大程度上仅限于顶复门寄生虫中鉴定了 SEC13 中的一个扩展的 C 末端多脯氨酸延伸,该延伸对寄生虫的存活至关重要,并提供了通过冷冻电子断层扫描获得的高分辨率疟原虫 NPC 图像。我们的数据为全面表征疟原虫中的 NPC 提供了基础,疟原虫是对人类健康有重大影响的早期分支单细胞真核生物。