Lvov D K, Alkhovsky S V, Kolobukhina L V, Burtseva E I
D.I. Ivanovsky Institute of Virology of National Research Centre for Epidemiology and Microbiology named after the honorary academician N.F. Gamaleya, Moscow, 123098, Russia.
Vopr Virusol. 2020;65(1):6-15. doi: 10.36233/0507-4088-2020-65-1-6-15.
Results of analysis of phylogenetic, virological, epidemiological, ecological, clinical data of COVID-19 outbreaks in Wuhan, China (PRC) in comparison with SARS-2002 and MERS-2012 outbreaks allow to conclude: - the etiological agent of COVID-19 is coronavirus (2019-CoV), phylogenetically close to the SARS-CoV, isolated from human, and SARS-related viruses isolated from bats (SARS-related bat CoV viruses). These viruses belong to the Sarbecovirus subgenus, Betacoronavirus genus, Orthocoronavirinae subfamily, Coronaviridae family (Cornidovirinea: Nidovirales). COVID-19 is a variant of SARS-2002 and is different from MERS-2012 outbreak, which were caused by coronavirus belonged to the subgenus Merbecovirus of the same genus; - according to the results of phylogenetic analysis of 35 different betacoronaviruses, isolated from human and from wild animals in 2002-2019, the natural source of COVID-19 and SARS-CoV (2002) is bats of Rhinolophus genus (Rhinolophidae) and, probably, some species of other genera. An additional reservoir of the virus could be an intermediate animal species (snakes, civet, hedgehogs, badgers, etc.) that are infected by eating of infected bats. SARS-like coronaviruses circulated in bats in the interepidemic period (2003-2019); - seasonal coronaviruses (subgenus Duvinacovirus, Alphacoronavirus) are currently circulating (November 2019 - January 2020) in the European part of Russia, Urals, Siberia and the Far East of Russia, along with the influenza viruses A(H1N1)pdm09, A(H3N2), and В, as well as six other respiratory viruses (HPIV, HAdV, HRSV, HRV, HBoV, and HMPV).
对中国武汉新冠疫情的系统发育、病毒学、流行病学、生态学及临床数据进行分析,并与2002年非典疫情和2012年中东呼吸综合征疫情进行比较,结果表明:- 新冠病毒的病原体是冠状病毒(2019-CoV),在系统发育上与从人类分离出的严重急性呼吸综合征冠状病毒(SARS-CoV)以及从蝙蝠分离出的SARS相关病毒相近。这些病毒属于Sarbecovirus亚属、β冠状病毒属、正冠状病毒亚科、冠状病毒科(日冕病毒目:巢病毒目)。新冠疫情是2002年非典疫情的变种,与2012年中东呼吸综合征疫情不同,后者由同一属Merbecovirus亚属的冠状病毒引起;- 根据对2002年至2019年间从人类和野生动物中分离出的35种不同β冠状病毒进行系统发育分析的结果,新冠病毒和SARS-CoV(2002)的天然宿主是菊头蝠科菊头蝠属的蝙蝠,可能还有其他一些属的某些物种。该病毒的额外宿主可能是通过捕食受感染蝙蝠而被感染的中间动物物种(蛇、果子狸、刺猬、獾等)。在疫情间歇期(2003年至2019年),类SARS冠状病毒在蝙蝠中传播;- 季节性冠状病毒(Duvinacovirus亚属,α冠状病毒)目前(2019年11月至2020年1月)在俄罗斯欧洲部分、乌拉尔地区、西伯利亚和俄罗斯远东地区传播,同时还有甲型(H1N1)pdm09流感病毒、甲型(H3N2)流感病毒、乙型流感病毒,以及其他六种呼吸道病毒(人副流感病毒、人腺病毒、人呼吸道合胞病毒、人鼻病毒、人博卡病毒和人偏肺病毒)。