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使用计算机视觉和行为遗传学区分睡眠和运动引起的疲劳。

Discriminating between sleep and exercise-induced fatigue using computer vision and behavioral genetics.

机构信息

Carney Institute for Brain Science, Brown University, Providence, RI, USA.

Department of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, RI, USA.

出版信息

J Neurogenet. 2020 Sep-Dec;34(3-4):453-465. doi: 10.1080/01677063.2020.1804565. Epub 2020 Aug 19.

Abstract

Following prolonged swimming, cycle between active swimming bouts and inactive quiescent bouts. Swimming is exercise for and here we suggest that inactive bouts are a recovery state akin to fatigue. It is known that cGMP-dependent kinase (PKG) activity plays a conserved role in sleep, rest, and arousal. Using EGL-4 PKG, we first validate a novel learning-based computer vision approach to automatically analyze locomotory behavior and an edge detection program that is able to distinguish between activity and inactivity during swimming for long periods of time. We find that EGL-4 PKG function impacts timing of exercise-induced quiescent (EIQ) bout onset, fractional quiescence, bout number, and bout duration, suggesting that previously described pathways are engaged during EIQ bouts. However, EIQ bouts are likely not sleep as animals are feeding during the majority of EIQ bouts. We find that genetic perturbation of neurons required for other sleep states also does not alter EIQ dynamics. Additionally, we find that EIQ onset is sensitive to age and DAF-16 FOXO function. In summary, we have validated behavioral analysis software that enables a quantitative and detailed assessment of swimming behavior, including EIQ. We found novel EIQ defects in aged animals and animals with mutations in a gene involved in stress tolerance. We anticipate that further use of this software will facilitate the analysis of genes and pathways critical for fatigue and other behaviors.

摘要

在长时间游泳后,动物会在主动游泳回合和不活跃的静止回合之间循环。游泳是一种运动,在这里我们认为不活跃的回合是一种类似于疲劳的恢复状态。已知 cGMP 依赖性激酶 (PKG) 活性在睡眠、休息和觉醒中起着保守作用。我们使用 EGL-4 PKG,首先验证了一种新颖的基于学习的计算机视觉方法,该方法可自动分析运动行为,以及一种边缘检测程序,该程序能够在长时间游泳过程中区分活动和不活动状态。我们发现 EGL-4 PKG 功能会影响运动诱导的静止 (EIQ) 回合开始、静止分数、回合数和回合持续时间,这表明在 EIQ 回合期间会激活之前描述的途径。然而,EIQ 回合可能不是睡眠,因为动物在大多数 EIQ 回合中都在进食。我们发现,其他 睡眠状态所需神经元的遗传干扰也不会改变 EIQ 动力学。此外,我们发现 EIQ 的开始时间对年龄和 DAF-16 FOXO 功能敏感。总之,我们已经验证了行为分析软件,该软件能够对游泳行为进行定量和详细评估,包括 EIQ。我们在老年动物和涉及应激耐受的基因突变动物中发现了新的 EIQ 缺陷。我们预计,这种软件的进一步使用将有助于分析对疲劳和其他 行为至关重要的基因和途径。

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