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在基因参考面板中鉴定高糖饮食下寿命的基因修饰因子。

Identification of genetic modifiers of lifespan on a high sugar diet in the Genetic Reference Panel.

作者信息

Patel Sumit P, Talbert Matthew E

机构信息

School of Sciences, Program in Biology, University of Louisiana at Monroe, Monroe, LA, USA.

出版信息

Heliyon. 2021 Jun 5;7(6):e07153. doi: 10.1016/j.heliyon.2021.e07153. eCollection 2021 Jun.

Abstract

Genome-wide association studies (GWAS) have become beneficial in identifying genetic variants underlying susceptibility to various complex diseases and conditions, including obesity. Utilizing the Genetic Reference Panel (DGRP), we performed a GWAS of lifespan of 193 genetically distinct lines on a high sugar diet (HSD). The DGRP analysis pipeline determined the most significant lifespan associated polymorphisms were within loci of genes involved in: neural processes, behavior, development, and apoptosis, among other functions. Next, based on the relevance to obesity pathology, and the availability of transgenic RNAi lines targeting the genes we identified, whole-body knockdown of several candidate genes was performed. We utilized the GAL4-UAS binary expression system to independently validate the impacts of these loci on lifespan during HSD. These loci were largely confirmed to affect lifespan in that HSD setting, as well as a normal diet setting. However, we also detected unexpected dietary effects of the HSD, including inconsistent diet effects on lifespan relative to a normal diet and a strong downregulation of feeding quantity.

摘要

全基因组关联研究(GWAS)已有助于识别包括肥胖症在内的各种复杂疾病和病症易感性背后的遗传变异。利用遗传参考面板(DGRP),我们对193个基因不同的品系在高糖饮食(HSD)下的寿命进行了GWAS。DGRP分析流程确定,与寿命最显著相关的多态性存在于参与神经过程、行为、发育和细胞凋亡等功能的基因座内。接下来,基于与肥胖病理学的相关性以及针对我们所识别基因的转基因RNAi品系的可用性,我们对几个候选基因进行了全身敲低。我们利用GAL4-UAS二元表达系统在HSD期间独立验证这些基因座对寿命的影响。在该HSD环境以及正常饮食环境中,这些基因座在很大程度上被证实会影响寿命。然而,我们也检测到了HSD意外的饮食效应,包括与正常饮食相比,饮食对寿命的影响不一致,以及进食量的强烈下调。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a31/8187823/63e382dd3866/gr1.jpg

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