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严重急性呼吸综合征冠状病毒2型人类T细胞表位:针对2019冠状病毒病的适应性免疫反应

SARS-CoV-2 human T cell epitopes: Adaptive immune response against COVID-19.

作者信息

Grifoni Alba, Sidney John, Vita Randi, Peters Bjoern, Crotty Shane, Weiskopf Daniela, Sette Alessandro

机构信息

Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology (LJI), La Jolla, CA 92037, USA.

Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology (LJI), La Jolla, CA 92037, USA; Department of Medicine, Division of Infectious Diseases and Global Public Health, University of California, San Diego (UCSD), La Jolla, CA 92037, USA.

出版信息

Cell Host Microbe. 2021 Jul 14;29(7):1076-1092. doi: 10.1016/j.chom.2021.05.010. Epub 2021 May 21.

Abstract

Over the past year, numerous studies in the peer reviewed and preprint literature have reported on the virological, epidemiological and clinical characteristics of the coronavirus, SARS-CoV-2. To date, 25 studies have investigated and identified SARS-CoV-2-derived T cell epitopes in humans. Here, we review these recent studies, how they were performed, and their findings. We review how epitopes identified throughout the SARS-CoV2 proteome reveal significant correlation between number of epitopes defined and size of the antigen provenance. We also report additional analysis of SARS-CoV-2 human CD4 and CD8 T cell epitope data compiled from these studies, identifying 1,400 different reported SARS-CoV-2 epitopes and revealing discrete immunodominant regions of the virus and epitopes that are more prevalently recognized. This remarkable breadth of epitope repertoire has implications for vaccine design, cross-reactivity, and immune escape by SARS-CoV-2 variants.

摘要

在过去一年中,同行评审文献和预印本中已有大量研究报告了新型冠状病毒SARS-CoV-2的病毒学、流行病学和临床特征。迄今为止,已有25项研究对人类体内源自SARS-CoV-2的T细胞表位进行了调查和鉴定。在此,我们回顾这些近期研究、其开展方式及研究结果。我们回顾了如何通过在整个SARS-CoV-2蛋白质组中鉴定出的表位,揭示已定义表位数量与抗原来源大小之间的显著相关性。我们还报告了对这些研究汇编的SARS-CoV-2人类CD4和CD8 T细胞表位数据的进一步分析,识别出1400个不同的已报告SARS-CoV-2表位,并揭示了该病毒离散的免疫显性区域以及更常被识别的表位。如此广泛的表位库对SARS-CoV-2变异株的疫苗设计、交叉反应性和免疫逃逸具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2131/8139264/d0616f83aac8/gr1_lrg.jpg

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