Department of Biology, College of Natural Science, Chosun University, Gwangju 501-759, South Korea; BK21 FOUR Education Research Group for Age-Associated Disorder Control Technology, Department of Integrative Biological Science, Chosun University, Gwangju 501-759, South Korea.
Department of Biology, College of Natural Science, Chosun University, Gwangju 501-759, South Korea; BK21 FOUR Education Research Group for Age-Associated Disorder Control Technology, Department of Integrative Biological Science, Chosun University, Gwangju 501-759, South Korea.
Mech Ageing Dev. 2022 Jun;204:111676. doi: 10.1016/j.mad.2022.111676. Epub 2022 Apr 27.
The abundance of the biological data and the rapid evolution of the newer machine learning technologies have increased the epigenetics research in the last decade. This has enhanced the ability to measure the biological age of humans and different organisms via their omics data. DNA methylation array data are commonly used in the prediction of methylation age. Horvath clock has been adopted in various aging studies as a DNA methylation age predicting clock due to its higher accuracy and multi tissue prediction potential. In the current study, we have developed a pan tissue methylation-aging clock by using the publicly available illumina 450k and EPIC array methylation datasets. In doing that, we developed a highly accurate epigenetic clock, which predicts the age of multiple tissues with higher accuracy. We have also analyzed the selected probes for their biological relevance. Upon analyzing the selected features further, we found out evidences, which support the Antagonistic pleiotropy theory of aging.
在过去的十年中,生物数据的丰富和新型机器学习技术的快速发展推动了表观遗传学研究。这提高了通过组学数据测量人类和不同生物的生物年龄的能力。DNA 甲基化阵列数据常用于预测甲基化年龄。由于其更高的准确性和多组织预测潜力,Horvath 时钟已被广泛应用于各种衰老研究中,作为一种 DNA 甲基化年龄预测时钟。在本研究中,我们使用公开的 illumina 450k 和 EPIC 阵列甲基化数据集开发了一个泛组织甲基化-衰老时钟。通过这样做,我们开发了一种高度准确的表观遗传时钟,它可以更准确地预测多种组织的年龄。我们还分析了所选探针的生物学相关性。在进一步分析所选特征后,我们发现了支持衰老的拮抗多效性理论的证据。