North-Western Tuscany Blood Bank, Pisa University Hospital, Pisa, Italy.
Department of Medicine, Johns Hopkins School of Public Health and School of Medicine, Baltimore, MD, USA.
Drug Resist Updat. 2022 Dec;65:100882. doi: 10.1016/j.drup.2022.100882. Epub 2022 Oct 3.
WHO-defined SARS-CoV-2 variants of concern (VOC) drive therapeutics and vaccine development. The Omicron VOC is dominating the arena since November 2021, but the number of its sublineages is growing in complexity. Omicron represent a galaxy with a myriad of stars that suddenly rise and expand before collapsing into apparent extinction when a more fit sublineage appears. This has already happened with BA.1, BA.2, and BA.4/5 and is happening with BA.2.75. We review here the current PANGO phylogeny, focusing on sublineages with Spike mutations, and show how frequently xxxxxxxx convergent evolution has occurred in these sublineages. We finally summarize how Omicron evolution has progressively defeated the anti-Spike monoclonal antibodies authorized so far, leaving clinicians to again fall back on COVID19 convalescent plasma from vaccinated donors as the only antibody-based therapy available.
世卫组织定义的关注变异株(VOC)推动了治疗方法和疫苗的研发。奥密克戎 VOC 自 2021 年 11 月以来一直占据主导地位,但它的亚谱系数量越来越复杂。奥密克戎代表着一个拥有无数恒星的星系,当一个更合适的亚谱系出现时,这些恒星会突然出现并扩张,然后看似灭绝。这种情况已经在 BA.1、BA.2 和 BA.4/5 中发生,并且正在 BA.2.75 中发生。我们在这里回顾当前的 PANGO 系统发育,重点关注带有 Spike 突变的亚谱系,并展示这些亚谱系中经常发生什么样的趋同进化。最后,我们总结了奥密克戎进化是如何逐步击败迄今为止授权的抗 Spike 单克隆抗体的,这使得临床医生再次依赖于从接种疫苗的供体中获得的 COVID19 恢复期血浆作为唯一可用的基于抗体的治疗方法。