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从基因型到表型:增强子如何调控造血过程中的基因表达和细胞身份

From Genotype to Phenotype: How Enhancers Control Gene Expression and Cell Identity in Hematopoiesis.

作者信息

Mulet-Lazaro Roger, Delwel Ruud

机构信息

Department of Hematology, Erasmus MC Cancer Institute, Rotterdam, the Netherlands.

Oncode Institute, Utrecht, the Netherlands.

出版信息

Hemasphere. 2023 Nov 8;7(11):e969. doi: 10.1097/HS9.0000000000000969. eCollection 2023 Nov.

Abstract

Blood comprises a wide array of specialized cells, all of which share the same genetic information and ultimately derive from the same precursor, the hematopoietic stem cell (HSC). This diversity of phenotypes is underpinned by unique transcriptional programs gradually acquired in the process known as hematopoiesis. Spatiotemporal regulation of gene expression depends on many factors, but critical among them are enhancers-sequences of DNA that bind transcription factors and increase transcription of genes under their control. Thus, hematopoiesis involves the activation of specific enhancer repertoires in HSCs and their progeny, driving the expression of sets of genes that collectively determine morphology and function. Disruption of this tightly regulated process can have catastrophic consequences: in hematopoietic malignancies, dysregulation of transcriptional control by enhancers leads to misexpression of oncogenes that ultimately drive transformation. This review attempts to provide a basic understanding of enhancers and their role in transcriptional regulation, with a focus on normal and malignant hematopoiesis. We present examples of enhancers controlling master regulators of hematopoiesis and discuss the main mechanisms leading to enhancer dysregulation in leukemia and lymphoma.

摘要

血液由各种各样的特化细胞组成,所有这些细胞都共享相同的遗传信息,并最终来源于同一个前体——造血干细胞(HSC)。这种表型的多样性是由在造血过程中逐渐获得的独特转录程序所支撑的。基因表达的时空调控取决于许多因素,但其中关键的是增强子——与转录因子结合并增加其控制下基因转录的DNA序列。因此,造血涉及造血干细胞及其后代中特定增强子库的激活,驱动一组共同决定形态和功能的基因的表达。这种严格调控的过程受到破坏可能会产生灾难性后果:在造血系统恶性肿瘤中,增强子对转录控制的失调会导致癌基因的错误表达,最终驱动细胞转化。本综述试图提供对增强子及其在转录调控中作用的基本理解,重点是正常和恶性造血。我们展示了控制造血主调节因子的增强子实例,并讨论了白血病和淋巴瘤中导致增强子失调的主要机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be0b/10635615/159f27ff7626/hs9-7-e969-g001.jpg

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