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第二代PIKfyve化学探针的研发

Development of a Second-Generation, Chemical Probe for PIKfyve.

作者信息

Min Sophia M, Bashore Frances M, Smith Jeffery L, Havener Tammy M, Howell Stefanie, Li Haoxi, Couñago Rafael M, Popov Konstantin I, Axtman Alison D

机构信息

Structural Genomics Consortium, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States.

Laboratory for Molecular Modeling, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States.

出版信息

J Med Chem. 2025 Feb 13;68(3):3282-3308. doi: 10.1021/acs.jmedchem.4c02531. Epub 2025 Jan 22.

Abstract

We optimized our highly potent and cell-active chemical probe for phosphatidylinositol-3-phosphate 5-kinase (PIKfyve), SGC-PIKFYVE-1, resulting in compounds with improved potency and demonstrated stability. Use of an in-cell, kinome-wide selectivity panel allowed for confirmation of excellent in-cell selectivity of our lead compound, , and another promising analogue, . Evaluation of the pharmacokinetic (PK) profiles of these two compounds revealed that both are well tolerated systemically and orally bioavailable. Coupled with its subnanomolar cellular potency and impressive selectivity in cells, the long half-life of makes it an ideal candidate for the evaluation of the consequences of PIKfyve inhibition . PIKfyve inhibition has been investigated clinically for indications including rheumatoid arthritis, Crohn's disease, COVID-19, and ALS using a single compound (apilimod), supporting the development of orthogonal PIKfyve inhibitors with stability.

摘要

我们优化了针对磷脂酰肌醇-3-磷酸5-激酶(PIKfyve)的高效且具有细胞活性的化学探针SGC-PIKFYVE-1,得到了活性提高且稳定性良好的化合物。通过使用细胞内全激酶组选择性筛选平台,确认了我们的先导化合物以及另一种有前景的类似物在细胞内具有出色的选择性。对这两种化合物的药代动力学(PK)特征进行评估后发现,它们在全身耐受性良好且具有口服生物利用度。结合其亚纳摩尔级的细胞活性以及在细胞中令人印象深刻的选择性,[化合物名称]的长半衰期使其成为评估PIKfyve抑制作用后果的理想候选物。临床上已经使用单一化合物(阿匹莫德)对PIKfyve抑制作用在类风湿性关节炎、克罗恩病、COVID-19和肌萎缩侧索硬化症等适应症方面进行了研究,这支持了开发具有稳定性的正交PIKfyve抑制剂。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7a2a/11831680/ba347023a271/jm4c02531_0001.jpg

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