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慢性肾脏病患者的加速表观遗传衰老和炎症/免疫特征(ipAGE)。

Accelerated epigenetic aging and inflammatory/immunological profile (ipAGE) in patients with chronic kidney disease.

机构信息

Institute of Information Technologies, Mathematics and Mechanics, Lobachevsky State University, Nizhny Novgorod, Russia.

Institute of Biology and Biomedicine, Lobachevsky State University, Nizhny Novgorod, Russia.

出版信息

Geroscience. 2022 Apr;44(2):817-834. doi: 10.1007/s11357-022-00540-4. Epub 2022 Mar 2.

Abstract

Chronic kidney disease (CKD) is defined by a reduced estimated glomerular filtration rate (eGFR). This failure can be related to a phenotype of accelerated aging. In this work, we considered 76 patients with end-stage renal disease (ESRD) and 83 healthy controls. We concomitantly evaluated for the first time two measures that can be informative of the rate of aging, i.e., whole blood DNA methylation using the Illumina Infinium EPIC array and plasma levels of a selection of inflammatory/immunological proteins using multiplex immunoassays. First of all, we demonstrated accelerated aging in terms of the most common epigenetic age estimators in CKD patients. Moreover, we developed a new clock/predictor of age based on the inflammatory/immunological profile (ipAGE) and identified the inflammatory/immunological biomarkers differentially expressed between cases and controls. IpAGE appeared to be more sensitive than epigenetic clocks in quantifying the accelerated aging phenotype of ESRD patients. Interestingly, we did not find any correlation between the age acceleration evaluated according to the epigenetic clocks and ipAGE in either the ESRD group or the control group. On the whole, our data show a consistent accelerated aging phenotype in ESRD patients, which is better appreciated by quantifying the underlying inflammatory processes (inflammaging) by ipAGE than by using epigenetic clocks.

摘要

慢性肾脏病(CKD)定义为肾小球滤过率(eGFR)降低。这种衰竭可能与加速衰老的表型有关。在这项工作中,我们考虑了 76 名终末期肾病(ESRD)患者和 83 名健康对照者。我们同时首次评估了两种可以提供衰老率信息的方法,即使用 Illumina Infinium EPIC 阵列进行全血 DNA 甲基化和使用多重免疫分析进行炎症/免疫蛋白选择的血浆水平。首先,我们证明了 CKD 患者在最常见的表观遗传年龄估算方面存在加速衰老。此外,我们开发了一种基于炎症/免疫特征(ipAGE)的新时钟/年龄预测器,并确定了病例和对照组之间差异表达的炎症/免疫生物标志物。IpAGE 似乎比表观遗传时钟更能敏感地量化 ESRD 患者的加速衰老表型。有趣的是,我们在 ESRD 组或对照组中均未发现根据表观遗传时钟和 ipAGE 评估的年龄加速之间存在任何相关性。总的来说,我们的数据显示 ESRD 患者存在一致的加速衰老表型,通过量化 ipAGE 下的潜在炎症过程(炎症衰老)比使用表观遗传时钟更好地评估这种表型。

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