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针对囊性纤维化患者分离出的铜绿假单胞菌的新型裂解性噬菌体PSA-KC1的分离与鉴定。

Isolation and characterization of new lytic bacteriophage PSA-KC1 against Pseudomonas aeruginosa isolates from cystic fibrosis patients.

作者信息

Kurt Kübra Can, Kurt Halil, Tokuç Edip, Özbey Doğukan, Arabacı Duygu Nur, Aydın Sevcan, Gönüllü Nevriye, Skurnik Mikael, Tokman Hrisi Bahar

机构信息

Hamidiye Faculty of Dentistry, Department of Basic Medical Sciences, University of Health Sciences, Istanbul, Türkiye.

Cerrahpasa Medical Faculty, Medical Microbiology Department, İstanbul University-Cerrahpasa, 34320, Istanbul, Türkiye, Turkey.

出版信息

Sci Rep. 2025 Feb 24;15(1):6551. doi: 10.1038/s41598-025-91073-1.

Abstract

A novel lytic bacteriophage, PSA-KC1, was isolated from wastewater. In this study, the whole genome of the bacteriophage PSA-KC1 was analyzed, and its lytic properties were assessed. PSA-KC1 has a linear double-stranded DNA genome with a total length of 43,237 base pairs and a GC content of 53.6%. In total, 65 genes were predicted, 46 of which were assigned functions as structural proteins involved in genome replication, packaging or phage lysis. PSA-KC1 belongs to the genus Septimatrevirus under the Caudoviricetes class. The aim of this study was to investigate the efficacy of the lytic bacteriophage PSA-KC1 and compare it with that of the Pyophage phage cocktail on 25 multi drug resistant (MDR) Pseudomonas aeruginosa strains isolated from sputum samples of cystic fibrosis patients. Seventeen of these strains were susceptible (68%) to the PSA-KC1 lytic phage we isolated, whereas eight clinical strains were resistant. However, 22 (88%) of the P. aeruginosa strains were susceptible to the Pyophage cocktail, and three (12%) were resistant to the Phage cocktail. At the end of our study, a new lytic phage active against multidrug-resistant P. aeruginosa strains from CF patients was isolated, and its genome was characterized. Since the PSA-KC1 phage does not contain virulence factors, toxins or integrase genes, it can be expected to be a therapeutic candidate with the potential to be used safely in phage therapy.

摘要

从废水中分离出一种新型裂解性噬菌体PSA-KC1。在本研究中,对噬菌体PSA-KC1的全基因组进行了分析,并评估了其裂解特性。PSA-KC1具有线性双链DNA基因组,全长43237个碱基对,GC含量为53.6%。总共预测了65个基因,其中46个基因被指定为参与基因组复制、包装或噬菌体裂解的结构蛋白的功能。PSA-KC1属于长尾噬菌体目下的Septimatrevirus属。本研究的目的是研究裂解性噬菌体PSA-KC1的疗效,并将其与噬菌体鸡尾酒对从囊性纤维化患者痰液样本中分离出的25株多重耐药铜绿假单胞菌菌株的疗效进行比较。这些菌株中有17株(68%)对我们分离的PSA-KC1裂解性噬菌体敏感,而8株临床菌株耐药。然而,22株(88%)铜绿假单胞菌菌株对噬菌体鸡尾酒敏感,3株(12%)对噬菌体鸡尾酒耐药。在我们的研究结束时,分离出一种对来自CF患者的多重耐药铜绿假单胞菌菌株具有活性的新型裂解性噬菌体,并对其基因组进行了表征。由于PSA-KC1噬菌体不包含毒力因子、毒素或整合酶基因,因此有望成为一种有潜力在噬菌体治疗中安全使用的治疗候选物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/80ad/11850609/34108a0833fc/41598_2025_91073_Fig1_HTML.jpg

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