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表观遗传年龄加速与两种肺血管疾病的因果关系:肺动脉高压和肺栓塞——一项双向孟德尔随机研究。

Causal association between epigenetic age acceleration and two pulmonary vascular diseases: pulmonary arterial hypertension and pulmonary embolism-a bidirectional Mendelian study.

机构信息

Department of Cardiology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, 1630 Dongfang Road, Pudong New Area, Shanghai, 200127, China.

Department of Cardiology, Shenzhen People's Hospital, First Affiliated Hospital of Southern University of Science and Technology, Second Clinical Medicine College of Jinan University, Shenzhen, China.

出版信息

Clin Epigenetics. 2024 Nov 29;16(1):172. doi: 10.1186/s13148-024-01778-9.

Abstract

BACKGROUND

Pulmonary arterial hypertension (PAH) is a relatively rare but severe disease with a poor prognosis. Pulmonary embolism (PE) is a serious condition that can cause sudden death. Epigenetic age acceleration (EAA) is a robust indicator derived from the DNA methylation-based epigenetic clock, which can predict the extent of aging. It has been proved that the epigenetic clock and EAA are associated with many cardiovascular diseases, while their associations with PAH and PE remain inconclusive. Our study aims to investigate the associations among these factors.

METHOD

By harnessing summary-level data from large-scale genome-wide association studies (GWAS), we designed a two-sample bidirectional Mendelian randomization (MR) analysis to assess the causal associations between measures of three epigenetic clocks, including GrimAge acceleration (n = 34,467), Hannum Age acceleration (n = 34,449) and PhenoAge acceleration (n = 34,463) and PAH (including 125 cases and 162,837 controls), as well as PE (including 3940 cases and 480,658 controls). The inverse variance-weighted (IVW) method was used as the primary method for MR analysis. Other methods, such as MR egger and weighted mode, served as complements to the IVW approach, were also applied in the analyses. Then, the MR pleiotropy test and MR-PRESSO test, which are effective tools for quality control of MR analysis, were subsequently used to ensure the accuracy of the study.

RESULTS

The forward MR analysis indicated that all three epigenetic clocks had no significant effects on PAH or PE. The reverse analysis indicated that the onset and progression of PAH and PE had insignificant effects on three epigenetic clocks. The results of the quality control assessment confirmed that our findings were reliable.

CONCLUSION

Our two-sample bidirectional MR analysis suggested that there is no significant association between epigenetic clocks and these two pulmonary vascular diseases.

摘要

背景

肺动脉高压(PAH)是一种相对罕见但严重的疾病,预后不良。肺栓塞(PE)是一种严重的疾病,可导致猝死。表观遗传年龄加速(EAA)是一种源自基于 DNA 甲基化的表观遗传时钟的稳健指标,可预测衰老程度。已经证明,表观遗传时钟和 EAA 与许多心血管疾病有关,而它们与 PAH 和 PE 的关联尚无定论。我们的研究旨在探讨这些因素之间的关联。

方法

利用来自大规模全基因组关联研究(GWAS)的汇总水平数据,我们设计了一项两样本双向孟德尔随机化(MR)分析,以评估三种表观遗传时钟的衡量指标(包括 GrimAge 加速(n=34467)、Hannum Age 加速(n=34449)和 PhenoAge 加速(n=34463))与 PAH(包括 125 例和 162837 例对照)以及 PE(包括 3940 例和 480658 例对照)之间的因果关联。逆方差加权(IVW)法被用作 MR 分析的主要方法。其他方法,如 MR egger 和加权模式,也被用作 IVW 方法的补充,也应用于分析中。然后,使用 MR 多效性检验和 MR-PRESSO 检验,这是 MR 分析质量控制的有效工具,随后用于确保研究的准确性。

结果

正向 MR 分析表明,三种表观遗传时钟均对 PAH 或 PE 没有显著影响。反向分析表明,PAH 和 PE 的发病和进展对三种表观遗传时钟没有显著影响。质量控制评估的结果证实了我们的发现是可靠的。

结论

我们的两样本双向 MR 分析表明,表观遗传时钟与这两种肺血管疾病之间没有显著关联。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/683f/11605945/3b0797b5596c/13148_2024_1778_Fig1_HTML.jpg

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